Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892169.1_cds_XP_016447072.1_41869
CDS Infomation

[gene=LOC107772099] [db_xref=GeneID:107772099] [protein=probable LRR receptor-like serine/threonine-protein kinase IRK] [protein_id=XP_016447072.1] [location=join(222424..223919,224106..225552)] [gbkey=CDS]
Sequence

ATGTTTTTGTTGTTGGTGGAGAAAAGGAGAGATTTTGTTTTGAGAATGTTACTGCATATA
TTAACTGTTTTATCCTTAACTCCATTTCTTGTGGAGTGTTTAGACCCTGCATTTAATGAT
GATGTAATGGGTTTAATTGTATTCAAAGCTGGATTCACTGACCCTAAATCAAAGCTTACA
TCTTGGACTGAAGATGATGCTACTCCTTGTAATTGGGTTGGTATAAAATGTGATCCTTAT
TCCAATAGAGTTTCTGAGATTCTGCTTGACAATTTCTCTCTTTCTGGGCATATAGGGAGA
AGCCTGTTGAGGTTACAATTCTTGAGGGTTTTATCTTTGTCTAAGAATAACTTTACAGGC
AATATTAATCCCATTCTTGCCCAAATACCAAGTTTGAGGGTTATTGATTTGAGTGACAAC
AGTTTGTCAGGGCCAATTCCTGATGAATTTTTTAGACAATGTGGGTCTCTACAAGCTGTT
TCCTTTGCCAAGAATAATCTCACTGGCCAAATCCCTGATTCTTTAACCTCTTGCTCAACA
CTAGAAAGGTTTAACTTTTCGTCGAACGGGCTTTCAGGTCAATTGCCCTCAGGGTTATGG
TCCCTGAGCTCTCTTCGATCCCTCGATGTTTCTGATAATTTATTGGAGGGTGAGATTCCT
AAATCAATTGAGGGTTTATATTCTTTGAGGTCAATTACTTTACAGAAAAACAAGTTCACT
GGTTGGCTGCCTGAAAATATTGGGAACTGTGTGCAGCTTAAGTCTATTGATCTCAGTGAG
AATTTGCTTAGTGGTGGCCTTCCTGAATCTATGAGAAGACTTGGTTTATGTACCACTATG
GATTTAAGATCAAATTCATTCAATGGGGAGATTCCAGATTGGATAGCTGAAATGAAAAGC
CTGCAAGTTTTGGATCTTTCTGCAAATAATCTTTCTGGTAGGATACCAAGCTCTATGGGA
GATCTTCCATTGCTAATGCAACTGAATTTGTCGAATAATCTGCTTGTTGGAAGCTTGCCT
CGGTCCTTGATGAAGTGCATTAACCTTGTAATCTTGGACATTGGGCACAACTTCTTGACT
GGTAATCTTCCTTCTTGGGCCTTCACATTGGGACTAAAGAGCATTTCCCTTTCCGGGAAT
AGGTTTACCGGAAGTATAGACTATCCGCCAATGTCCATAGCTGCTTCCTATCAAAGCCTT
CAAGTTTTGGATTTGTCCTCCAATGCATTATCTGGTGAAATACCGTCTGCCATTTGGAAC
ATCATTAGCTTGCAGGTCATGAATATTTCCCGGAACTTTTTGACAGGTATTATCCCAGAA
GCTGTAGGTAAACTAAATGCAACCCGAGTTCTTGATTTAAGTCACAATCAACTTAATGGA
AGCATTCCCCATGAAATTGGGAGTGCTGTTTCATTGCTGGAACTGAAGTTGAGAGAAAAT
CATCTGAGTGGTACAATTCCTGCGGATATAGCAAATTGCTCCGCTCTAACTTCATTGGAC
CTGTCACACAACAACCTCACTGGCCCTATCCCTCCAGAGATTGCTAAGTTAACCATTCTC
GAGGTAGTGGATTTCTCTTTTAACCAAATTTCTGGGAGCTTGCCTAAAGAACTAACCAAC
CTTTCCCACCTTGTCACATTTAATGTATCCCACAACCATCTCAAAGGTGAACTTCCAGTA
GGTGGCTTTTTCAACACCATTTCTCCCTCATCTGTTGTGGGTAATCCATCCCTTTGTGGT
TCTGTTCTCAACCACTCTTGCCCTGCGGTCCATCCCAAGCCTCTTGTACTGAACCCCAAT
TCATCTGACTCGAGTCATGGTTCTGTTAATTCGCTTGGTCGTAAGAGAATCATGCTCAGT
ATATCATCTCTCATTGCCATTGGAGCGGCAGTTTTCATAGCTCTTGGAGTAGTGGTTGTC
AGTATTCTCAATCTACACGTGCGCTCTTCTATGGCACTCTCTGCTGCAACTTTCACCTTA
TCTGGTGGCGATGACTATAGCCATTCACATGGTACAGAAGCCAACCTCGGCAAACTTGTT
ATGTTCTCTGGTGATGCAGATTTTGTTGCTGGAACTCAAGCGCTGCTCAACAAGGGTAAC
GAACTTGGACGTGGTGGTTTCGGAGCCGTTTACAAGACAGAACTCGGAGATGGACGTTCT
GTTGCTATCAAGAAGCTCAACATTACAAGTTTGATCAAGTCACAAGAAGATTTTGAGAGT
GAAATGAAAAGTCTCGGAAGCATCAGACACCAGAACCTAGTGGCACTTGAAGGTTATTAT
TGGACTCCTCCTCTTCAGCTCCTGATTAATGAGTATGTATCTGGTGGAAGCTTGTACAAA
TTACTCCATGAGGAAAGCTCTAAAAGCAGTCTCTCTTGGCAGCAAAGATTCAACATTATT
CTTGATACGGCCAAGGGCTTAGCCTATCTGCACCAGCTGAGCATTATTCACTACAATATG
AAGTCAACCAATGTCCTCATAGACGATGCTTCTGCCAATGCCAAAGTTGGAGATTTTGGC
TTGGCTCGTTTATTACCCGTCTTGGATCGTTACATCTTGAGCAGCAAGATTCAGAGTGCA
CTTGGATACATGGCTCCTGAATTTGCATGCCAAACAGTAAAGATAACTGAGAAATGTGAT
GTCTATGGATTTGGTATCTTGATTCTTGAGGTGGTGACAGGGAAAAGACCCGTAGAGTAC
ATGGAAGATGATGTGGTTGTATTATGTGACATGGTGCGGGGGGCATTGGAAGAAGGCAGG
ATAGAAGAGTGCATTGACCAACGGCTCCAAGGTAACTTCCCCGTCGAAGAGGCAATTCCA
GTTGTGAAACTTGGTTTAATATGTGCATCTCAAGTTCCATCAAATCGACCAGATATGGAA
GAAGTGATCAAAATTTTGGAGTTAATCCGATGTCCATCAGAAAGTCCAGAGGAGATAGAG
TAA

Peptide Sequence

PEP ID

XP_016447072.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase IRK [Nicotiana tabacum]
Sequence

MFLLLVEKRRDFVLRMLLHILTVLSLTPFLVECLDPAFNDDVMGLIVFKAGFTDPKSKLT
SWTEDDATPCNWVGIKCDPYSNRVSEILLDNFSLSGHIGRSLLRLQFLRVLSLSKNNFTG
NINPILAQIPSLRVIDLSDNSLSGPIPDEFFRQCGSLQAVSFAKNNLTGQIPDSLTSCST
LERFNFSSNGLSGQLPSGLWSLSSLRSLDVSDNLLEGEIPKSIEGLYSLRSITLQKNKFT
GWLPENIGNCVQLKSIDLSENLLSGGLPESMRRLGLCTTMDLRSNSFNGEIPDWIAEMKS
LQVLDLSANNLSGRIPSSMGDLPLLMQLNLSNNLLVGSLPRSLMKCINLVILDIGHNFLT
GNLPSWAFTLGLKSISLSGNRFTGSIDYPPMSIAASYQSLQVLDLSSNALSGEIPSAIWN
IISLQVMNISRNFLTGIIPEAVGKLNATRVLDLSHNQLNGSIPHEIGSAVSLLELKLREN
HLSGTIPADIANCSALTSLDLSHNNLTGPIPPEIAKLTILEVVDFSFNQISGSLPKELTN
LSHLVTFNVSHNHLKGELPVGGFFNTISPSSVVGNPSLCGSVLNHSCPAVHPKPLVLNPN
SSDSSHGSVNSLGRKRIMLSISSLIAIGAAVFIALGVVVVSILNLHVRSSMALSAATFTL
SGGDDYSHSHGTEANLGKLVMFSGDADFVAGTQALLNKGNELGRGGFGAVYKTELGDGRS
VAIKKLNITSLIKSQEDFESEMKSLGSIRHQNLVALEGYYWTPPLQLLINEYVSGGSLYK
LLHEESSKSSLSWQQRFNIILDTAKGLAYLHQLSIIHYNMKSTNVLIDDASANAKVGDFG
LARLLPVLDRYILSSKIQSALGYMAPEFACQTVKITEKCDVYGFGILILEVVTGKRPVEY
MEDDVVVLCDMVRGALEEGRIEECIDQRLQGNFPVEEAIPVVKLGLICASQVPSNRPDME
EVIKILELIRCPSESPEEIE

Transcript Sequence

Gene sequence data has not been registered.